论文发表：

33. Yang, Q. S., J. D. Dong, M. Ahmad, J. Ling, W. G. Zhou, Y. H. Tan, Y. Z. Zhang, D. D. Shen*, and Y. Y. Zhang*. Analysis of nifH DNA and RNA reveals a disproportionate contribution to nitrogenase activities by rare plankton-associated diazotrophs. BMC Microbiology. 2019.  19:188.

32. Ahmad, M., Q. Yang, Y. Zhang, J. Ling*, W. Sajjad, S. Qi, W. Zhou, Y. Zhang, X. Lin, Y. Zhang, and J. Dong*. The distinct response of phenanthrene enriched bacterial consortia to different PAHs and their degradation potential: a mangrove sediment microcosm study. Journal of Hazardous Materials. 2019. 380:1-10.

31. Zhou, W. G., D. W. Ding, Q. S. Yang, M. Ahmad, Y. Z. Zhang, X. C. Lin, Y. Y. Zhang, J. Ling, and J. D. Dong*. Marileptolyngbya sina gen. nov., sp. nov. and Salileptolyngbya diazotrophicum gen. nov., sp. nov. (Synechococcales, Cyanobacteria), species of cyanobacteria isolated from a marine ecosystem. Phytotaxa. 2018. 383:75-92.

30. Zeng, S., J. Ling, M. Ahmad, L. Lin, Y. Zhang, C. Wang, and J. Dong*. Culturable fungal diversity and cellulase production by mixed culture Aspergillus fungi from Sanya mangrove. Journal of General and Applied Microbiology. 2018. 64:293-298.

29. Ling, J., X. Lin, Y. Zhang, W. Zhou, Q. Yang, L. Lin, S. Zeng, Y. Zhang, C. Wang, M. Ahmad, L. Long, and J. Dong*. Community Composition and Transcriptional Activity of Ammonia-Oxidizing Prokaryotes of Seagrass Thalassia hemprichii in Coral Reef Ecosystems. Frontiers in Microbiology 2018. 9:1-7

28. Zhang Y, Yang Q, Ling J, Van Nostrand JD, Shi Z, Zhou J and Dong J*. Diversity and Structure of Diazotrophic Communities in Mangrove Rhizosphere, Revealed by High-Throughput Sequencing. Front. Microbiol. 2017. 8: (2032), 1-11

27. Juan Ling,Liyun Lin, Yanying Zhang, Xiancheng Lin, Manzoor Ahamad, Weiguo Zhou, Junde Dong*.Draft Genome Sequence of Marinobacter hydrocarbonoclasticus strain STW2, a polyaromatic aromatic hydrocarbon degrading and denitrifying bacterium from rhizosphere of Seagrass Enhalus acodoides, genomeA, 2017, 5(8): e01412-16.

26. Zhang Y, Yang Q,Ling J,Van Nostrand JD, Shi Z, Zhou J, Dong J*. The Shifts of Diazotrophic Communities in Spring and Summer Associated with CoralGalaxea astreata, Pavona decussata, and Porites lutea.  Front. Microbiol., 2016, 7: 1870.doi: 10.3389/fmicb.2016.01870. 

25. Yanying Zhang, Juan Ling, Qingsong Yang, Youshao Wang, Cuici Sun, Hongyan Sun, Jingbin Feng, Yufeng Jiang, Yuanzhou Zhang, Meilin Wu, Junde Dong*, The diversity of coral associated bacteria and the environmental factors affect their community variation, Ecotoxicology, 2015, 24(7-8): 1467-1477.

24. Yanying Zhang, Juan Ling, Qingsong Yang, Chongqing Wen, Qingyun Yan, Hongyan Sun, Joy D. Van Nostrand, Zhou Shi, Jizhong Zhou, Junde Dong*. The functional gene composition and metabolic potential of coral-associated microbial communities. Scientific Reports. 2015, 5: 16191.

23. Yufeng Jiang, Juan Ling, Junde Dong*, Biao Chen, Yanying Zhang, Yuanzhou Zhang, Youshao Wang. Illumina-based analysis the microbial diversity associated with Thalassia hemprichii in Xincun Bay, South China Sea. Ecotoxicology, 2015, 24(7-8): 1548-1556.

22. Yufeng Jiang, Juan Ling, Youshao Wang, Biao Chen, Yanying Zhang, Junde Dong*. Cultivation-dependent analysis of the microbial diversity associated with the seagrass meadows in Xincun Bay, South China Sea. Ecotoxicology, 2015, 24(7-8): 1540-1547. 

21. Juan Ling, Yu-Feng Jiang, You-Shao Wang, Jun-De Dong, Yan-Ying Zhang, Yuan-Zhou Zhang. Responses of bacterial communities in Seagrass Enhalus acoroides Sediments to Polycyclic Aromatic Hydrocarbon-induced stress. Ecotoxicology, 2015, 24(7-8): 1517-1528. 

20. Juan Ling，Yanying Zhang，Meilin Wu，Youshao Wang，Junde Dong，Yufeng Jiang， Siquan Zeng. Fungal Community Successions in Rhizosphere Sediment of Seagrasses Enhalus acoroides under PAHs Stress. International Journal Of Molecular Sciences, 2015, 16(6): 14039-14055. 

19. Juan Ling, Yanying Zhang, Junde Dong, Youshao Wang, Jingbing Feng, Hongyan Sun, Weihua Zhou. Spatial variations of bacterial community and its relationship with water chemistry in Sanya Bay, South China Sea as determined by DGGE fingerprinting and multivariate analysis. Ecotoxicology, 2015, 24(7-8), 1486-1497.

18. Juan Ling^#, Meilin Wu^#, Yongfu Chen, Yanying Zhang, Junde Dong*. Identification of spatial and temporal patterns of coastal waters in Sanya Bay, South China Sea by chemometrics. Journal of Environmental Informatics. 2014,23(1):37-43

17. Mei-Lin Wu, You-Shao Wang, Dong-Xiao Wang, Jun-De Dong*.  Effects of coastal upwelling on picophytoplankton distribution off the coast of Zhanjiang in South China Sea. Oceanological and Hydrobiological Studies. 2014,43(3):283-291.

16. Xiaofang Huang, Yujuan Liu, Junde Dong, Lingyun Qu, Yanying Zhang, Fazuo Wang, Xinpeng Tian*, Si Zhang*. Mangrovibacteriumdiazotrophicum gen. nov., sp. nov., a nitrogen-fixing bacterium isolated from a mangrove sediment, and proposal of Prolixibacteraceae fam. nov. International Journal of Systematic and Evolutionary Microbiology. 2014,64:875-881.

15. Juan Ling, Yanying Zhang, Junde Dong*, Youshao Wang, Hui Huang, Lei Chen, Xiaofang Huang, Lijuan Long, Si Zhang. Spatial variability of cyanobacterial community composition in Sanya Bay as determined by DGGE Fingerprinting and Multivariate Analysis. Chinese Science Bulletin 2013,58(9):10191-1027.

14. Juan Ling , Junde Dong, You-Shao Wang, Yan-Ying Zhang, Chao Deng, Li Lin, Mei-Lin Wu. Fu-Lin Sun. Spatial Variation of Bacterial Community Structure of the Northern South China Sea in Relation to Water Chemistry. Ecotoxicoloy. 2012, 21(6): 1669–1679.

13. Mei-Lin Wu, Yan-Ying Zhang, Li-Juan Long, Si Zhang, You-Shao Wang, Juan Ling, Junde Dong. Identification of coastal water quality including heavy metal in Sanya Bay, South China Sea. Polish Journal of Environment Studies. 2012, 21(5): 1445-1452.

12. Mei-Lin Wu, Juan Ling, Li-Juan Long, Si Zhang, Yan-Ying Zhang, You-Shao Wang, Junde Dong. Influence of human activity and monsoon dynamics on spatial and temporal hydrochemistry in tropical coastal waters (Sanya Bay, South China Sea). Chemistry and Ecology. 2012, 28(4):375–390.

11. Mei-Lin Wu, You-Shao Wang, Haili Wang, Song Sun, Cui-Ci Sun, Jun-De Dong, Jingfeng Wu. Monsoon-driven Dynamics of water quality in Daya Bay, South China Sea by multivariate statistical methods. Oceanological and Hydrobiological studies. Oceanological and Hydrobiological studies. 2012, 41(4): 66-76.

10. MiYeon Yang, Jun-De Dong, Myung Sook Kim. Taxonomic notes on five species of Gracilariaceae from Hainan, China. Algae 2012, 27(3): 175-187.

9. Ling Juan, Zhang Yanying, Dong Junde*, Wang Youshao, Chen Lei, Feng Jingbin, Sun Hongyan, Wang Dongxiao and Zhang Si, Spatial variation of bacterial community composition near the Luzon strait assessed by polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) and multivariate analyses, African Journal of Biotechnology, 2011, 10(74):16897-16908.

8. Mei-Lin Wu，Yan-Ying Zhang, Jun-De Dong, Identi cation of coastal water quality by self-organizing map in Sanya Bay, South China Sea, Aquatic Ecosystem Health & Management, 2011, 14(3):291–297.

7. Junde Dong*, Yanying Zhang，Si Zhang, Youshao Wang, Meilin Wu.  Identification of temporal and spatial variations of water quality in Sanya Bay, China by three-way principal component analysis. Environmental Earth Sciences. 2010, 60(8):1673-1683.

6. Junde Dong*, Yangying Zhang，Youshao Wang，Meilin Wu，Si Zhang. Chemometry use in the evaluation of the Sanya Bay water quality. Brazilian Journal Oceanography. 2010, 58(4) ：138-146.

5. Yanying Zhang, Junde Dong*, Juan Ling, Youshao Wang and Si Zhang.  Phytoplankton distribution and their relationship to environmental variables in Sanya Bay, South China Sea. Scientia Marina. 2010, 74(4): 568-575.

4. Guanghua Wang, Junde Dong, Xiang Li, Huimin Sun. The bacteria diversity in surface sediments from South China Sea.  Acta Oceanologica Sinica.  2010, 29(4): 98-105.

3. Yanying Zhang, Junde Dong*, Bin Yang, Juan Ling, Youshao Wang, Si Zhang. Bacterial community structure of mangrove sediments in relation to environmental variables accessed by 16S rRNA -DGGE fingerprinting. Scientia Marina. 2009, 73 (3): 487-498.

2. Junde Dong*, Yanying Zhang, Youshao Wang, Si Zhang, Hankui Wang. Spatial and seasonal variations of cyanobacteria nitrogen fixation rates in Sanya Bay, South China Sea. Scientia Marina, 2008, 72 (2): 239-251.

1. Yanying Zhang, Junde Dong*, Zhihao Yang, Si Zhang, Youshao Wang. Phylogenetic diversity of nitrogen-fixing bacteria in mangrove sediments assessed by PCR- DGGE. Archives of Microbiology. 2008, 190 (1): 19-28.

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